The table below shows Bolton Wanderers's overall record against each of their League One opponents.
| Opposition | P | W | D | L | F | A |
|---|---|---|---|---|---|---|
| Accrington Stanley | 6 | 2 | 1 | 3 | 7 | 12 |
| AFC Wimbledon | 8 | 4 | 4 | 0 | 16 | 7 |
| Barnsley | 8 | 2 | 4 | 2 | 12 | 12 |
| Birmingham City | 2 | 1 | 0 | 1 | 3 | 3 |
| Blackpool | 8 | 2 | 3 | 3 | 9 | 12 |
| Bradford City | 4 | 0 | 4 | 0 | 3 | 3 |
| Bristol Rovers | 10 | 5 | 3 | 2 | 16 | 11 |
| Burton Albion | 12 | 5 | 4 | 3 | 17 | 18 |
| Bury | 2 | 1 | 1 | 0 | 2 | 0 |
| Cambridge United | 8 | 3 | 4 | 1 | 10 | 6 |
| Cardiff City | 2 | 1 | 0 | 1 | 1 | 2 |
| Carlisle United | 2 | 1 | 0 | 1 | 5 | 4 |
| Charlton Athletic | 10 | 5 | 2 | 3 | 19 | 14 |
| Cheltenham Town | 6 | 4 | 1 | 1 | 9 | 4 |
| Chesterfield | 2 | 0 | 1 | 1 | 0 | 1 |
| Coventry City | 4 | 1 | 2 | 1 | 4 | 4 |
| Crawley Town | 2 | 2 | 0 | 0 | 6 | 3 |
| Crewe Alexandra | 2 | 2 | 0 | 0 | 3 | 0 |
| Derby County | 4 | 1 | 1 | 2 | 3 | 4 |
| Doncaster Rovers | 5 | 2 | 2 | 1 | 7 | 4 |
| Exeter City | 8 | 6 | 1 | 1 | 21 | 7 |
| Fleetwood Town | 9 | 8 | 0 | 1 | 21 | 11 |
| Forest Green Rovers | 2 | 1 | 0 | 1 | 1 | 1 |
| Gillingham | 5 | 3 | 1 | 1 | 13 | 7 |
| Huddersfield Town | 4 | 2 | 1 | 1 | 6 | 8 |
| Ipswich Town | 5 | 2 | 1 | 2 | 8 | 10 |
| Leyton Orient | 6 | 4 | 1 | 1 | 10 | 7 |
| Lincoln City | 11 | 6 | 3 | 2 | 19 | 13 |
| Luton Town | 2 | 0 | 1 | 1 | 3 | 4 |
| Mansfield Town | 4 | 2 | 0 | 2 | 5 | 4 |
| Millwall | 2 | 2 | 0 | 0 | 4 | 0 |
| Milton Keynes Dons | 8 | 3 | 3 | 2 | 13 | 8 |
| Morecambe | 4 | 1 | 3 | 0 | 3 | 2 |
| Northampton Town | 8 | 5 | 2 | 1 | 13 | 8 |
| Oldham Athletic | 2 | 1 | 0 | 1 | 2 | 1 |
| Oxford United | 9 | 5 | 2 | 2 | 16 | 10 |
| Peterborough United | 11 | 5 | 3 | 3 | 18 | 11 |
| Plymouth Argyle | 6 | 2 | 1 | 3 | 4 | 7 |
| Port Vale | 8 | 6 | 1 | 1 | 14 | 3 |
| Portsmouth | 8 | 1 | 2 | 5 | 6 | 10 |
| Reading | 6 | 2 | 2 | 2 | 13 | 9 |
| Rochdale | 4 | 1 | 0 | 3 | 2 | 6 |
| Rotherham United | 7 | 1 | 1 | 5 | 7 | 17 |
| Scunthorpe United | 2 | 1 | 0 | 1 | 2 | 2 |
| Sheffield United | 2 | 1 | 0 | 1 | 1 | 2 |
| Sheffield Wednesday | 4 | 0 | 2 | 2 | 2 | 5 |
| Shrewsbury Town | 11 | 7 | 3 | 1 | 20 | 12 |
| Southend United | 3 | 2 | 1 | 0 | 5 | 3 |
| Stevenage | 6 | 3 | 3 | 0 | 13 | 5 |
| Stockport County | 4 | 0 | 1 | 3 | 2 | 10 |
| Sunderland | 4 | 1 | 2 | 1 | 7 | 2 |
| Swindon Town | 2 | 1 | 0 | 1 | 2 | 2 |
| Tranmere Rovers | 2 | 1 | 0 | 1 | 2 | 5 |
| Walsall | 2 | 1 | 0 | 1 | 4 | 2 |
| Wigan Athletic | 8 | 3 | 1 | 4 | 7 | 13 |
| Wrexham | 2 | 0 | 2 | 0 | 0 | 0 |
| Wycombe Wanderers | 12 | 4 | 1 | 7 | 13 | 17 |